Elements unite actually work for the final boss. I managed to do all 3 missions in one duel using this list:
1x Pyrorex
1x Beast of Serket
3x Brushfire Knight
2x Crystal Seer
2x any normal FIRE monster
1x Riryoku
1x Shooting Star Bow - Ceal
1x Temple of the Kings
2x White elephant's gift
2x Any field spell
1x The Humble Sentry
1x Gift of the Martyr
3x Jar of Greed
1x Ble-Eyes Ultimate Dragon
The decks works like most normal Elements Unite decks, get Gate Guardian out and draw into your combo. In this case, however, set your crystal seers and your fire monsters and let the boss destroy them, but be very careful so that you won't be forced to mill Pyrorex with Brushfire. The final combo works by summoning pyrorex, activating Temple, tribute Gate Guardian to normal summon Serket, activate temple's effect to summon Blue-Eyes Ultimate from the fusion deck, use rirsoko on ultimate, give power to pyrorex, then use gift of the martyr, tributing Ultimate and giving power to Pyrorex, finally give ceal to pyrorex and attack directly for 8550 direct damage.
If you managed to activate both field spells and waited until it was 3 or less cards in your deck you should have all 3 missions done.
IMPORTANT NOTE: this isn't a perfectly safe build, it's still possible that the boss summons Pyre of malice and destroys one of its own monsters to pop the Michizure on your monster.
I hope this still helps someone. gl for those still doing the event.